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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015828505.1_cds_XP_016503429.1_16976
CDS Infomation

[gene=LOC107821508] [db_xref=GeneID:107821508] [protein=phosphatase IMPL1, chloroplastic-like] [protein_id=XP_016503429.1] [location=join(38540..38803,40365..40432,41066..41199,42849..42937,43624..43681,43768..43820,44183..44281,44386..44499,45389..45490,45772..45870)] [gbkey=CDS]
Sequence

ATGGGAAGATGTCTTCTTTCATCCACAGTTTCAACTTTTCTTCCTTGTAATCTCCCTAAA
CTGGCATTCCCCAAGAGTTTTAGCGCAAATTCAGCGTTTTCTCATCACGGGTTTTGTTCG
ACTGGAGCCAAAACCGGTGGAGCATTTTGCACAAAGGCTGCTTTATCGAATGTGTACTCA
AAGATTGGAGCCGACTCAACTGGAAGTATCCCCTCTAATGAGCTACTCCAAGTAGTTGAA
GCTGCTGCCAAGACTGGTGCTCAGGTTGTAATGGATGCTGTGAATAAGCCTCGGAATGTT
ACCTATAAAGGGCTCACTGACCTTGTGACCGACACAGATAAAAGTAGTGAAGTTGCTATC
CTTGAAGTAGTGAGGAAGAATTTTCCGGATCATCTAATTCTTGGGGAGGAAGGAGGAATT
ATTGGGGATTCATCATCGGATTATCTTTGGTGCATTGATCCTTTAGATGGAACAACAAAC
TTTGCGCATGGCTATCCTAGCTTTGCGGTCTCTGTGGGTGTTCTTTTTAGAGGGAAGCCA
GCTGCAGCTACTGTGGTTGAGTTTGTTGGTGGCCCTATGTGTTGGAATACTCGCATATTT
TCTGCAGCTGCAGGCAAAGGAGCCTTTGCTAATGGTGAAAAGATTCATGTCAGTGGAACT
GACAAGGTGGAACAATCTCTTCTGGTGACTGGATTTGGATATGAGCATGATGATCCATGG
GCAACCAATATGGAATTGTTCAAGGACTTTACTGATGTTAGCCGGGGTGTTAGAAGGCTT
GGTGCTGCTGCAGTGGACATGTGTCATGTTGCTTTGGGGATTGCTGAAGCATATTGGGAA
TATCGCTTAAAGCCATGGGACATGGCTGCAGGAGTTCTGATAGTTGAAGAGGCTGGAGGG
AAAGTTTCATGTATGGATGGTGGAAAGTTTTCAGTATTTGATAGATCTGTCTTGGTATCC
AATGGTTTGCTCCATGCAAAGCTCCTTGAGAAAATTGGTCCAGCAACAGAGAATTTGAAG
GGAAAAGGGATTGATTTCTCAGTGTGGTTCAAGCCAGAAAATTATCATACAGAAGTTTGA

Peptide Sequence

PEP ID

XP_016503429.1
PEP Infomation

PREDICTED: phosphatase IMPL1, chloroplastic-like [Nicotiana tabacum]
Sequence

MGRCLLSSTVSTFLPCNLPKLAFPKSFSANSAFSHHGFCSTGAKTGGAFCTKAALSNVYS
KIGADSTGSIPSNELLQVVEAAAKTGAQVVMDAVNKPRNVTYKGLTDLVTDTDKSSEVAI
LEVVRKNFPDHLILGEEGGIIGDSSSDYLWCIDPLDGTTNFAHGYPSFAVSVGVLFRGKP
AAATVVEFVGGPMCWNTRIFSAAAGKGAFANGEKIHVSGTDKVEQSLLVTGFGYEHDDPW
ATNMELFKDFTDVSRGVRRLGAAAVDMCHVALGIAEAYWEYRLKPWDMAAGVLIVEEAGG
KVSCMDGGKFSVFDRSVLVSNGLLHAKLLEKIGPATENLKGKGIDFSVWFKPENYHTEV

Transcript Sequence

Gene sequence data has not been registered.